U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GAGE13 G antigen 13 [ Homo sapiens (human) ]

Gene ID: 645051, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
GAGE13provided by HGNC
Official Full Name
G antigen 13provided by HGNC
Primary source
HGNC:HGNC:29081
See related
Ensembl:ENSG00000274274 MIM:300734; AllianceGenome:HGNC:29081
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GAGE-13; GAGE12A; GAGE-12A
Expression
Restricted expression toward testis (RPKM 122.7) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
Xp11.23
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (49331582..49338949)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (48743423..48750747)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (49188060..49195366)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905188 Neighboring gene G antigen 10 Neighboring gene G antigen 12J Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:49216999-49217663 Neighboring gene G antigen 12B Neighboring gene G antigen 12C

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. An overview of the GAGE cancer/testis antigen family with the inclusion of newly identified members. Gjerstorff MF, et al. Tissue Antigens, 2008 Mar. PMID 18179644
  2. A Genome-Wide CRISPR Screen Identifies Genes Critical for Resistance to FLT3 Inhibitor AC220. Hou P, et al. Cancer Res, 2017 Aug 15. PMID 28625976, Free PMC Article
  3. Creation of genome-wide protein expression libraries using random activation of gene expression. Harrington JJ, et al. Nat Biotechnol, 2001 May. PMID 11329013
  4. The DNA sequence of the human X chromosome. Ross MT, et al. Nature, 2005 Mar 17. PMID 15772651, Free PMC Article
  5. Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism. Antoniali G, et al. Nat Commun, 2017 Oct 6. PMID 28986522, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Clone Names

  • MGC163246

General protein information

Go to the top of the page Help
Preferred Names
G antigen 13
Names
G antigen 12A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098412.4 → NP_001091882.2  G antigen 13

    Status: VALIDATED

    Source sequence(s)
    AC233302
    Consensus CDS
    CCDS48110.1
    UniProtKB/Swiss-Prot
    A0A087X111, Q4V321
    UniProtKB/TrEMBL
    B7ZVY3
    Related
    ENSP00000483811.1, ENST00000612958.2
    Conserved Domains (1) summary
    pfam05831
    Location:1 → 111
    GAGE; GAGE protein

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    49331582..49338949
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    48743423..48750747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4V321.2 GenPept UniProtKB/Swiss-Prot:Q4V321

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous