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J5U23_RS00420 DNA-directed RNA polymerase subunit H [ Saccharolobus shibatae B12 ]

Gene ID: 65561651, updated on 31-Jan-2024

Summary

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Gene symbol
J5U23_RS00420
Gene description
DNA-directed RNA polymerase subunit H
Locus tag
J5U23_RS00420
Gene type
protein coding
Organism
Saccharolobus shibatae B12 (strain: B12, type-material: type strain of Sulfolobus shibatae)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus
Old locus tag
J5U23_00029
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Genomic context

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NZ_CP077717.1Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L24e Neighboring gene nucleoside-diphosphate kinase Neighboring gene translation initiation factor IF-2 Neighboring gene DNA-directed RNA polymerase subunit B Neighboring gene DNA-directed RNA polymerase subunit A' Neighboring gene DNA-directed RNA polymerase subunit A'' Neighboring gene 50S ribosomal protein L30e

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP077717.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA polymerase subunit H features a beta-ribbon motif within a novel fold that is present in archaea and eukaryotes. Thiru A, et al. J Mol Biol, 1999 Apr 9. PMID 10191143
  2. Component H of the DNA-dependent RNA polymerases of Archaea is homologous to a subunit shared by the three eucaryal nuclear RNA polymerases. Klenk HP, et al. Proc Natl Acad Sci U S A, 1992 Jan 1. PMID 1729711, Free PMC Article
  3. New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae. Medvedeva S, et al. Environ Microbiol, 2021 Aug. PMID 34190379

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DNA-directed RNA polymerase subunit H
WP_012711883.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP077717.1 Reference assembly

    Range
    25651..25905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012711883.1 MULTISPECIES: DNA-directed RNA polymerase subunit H [Sulfolobaceae]

    See identical proteins and their annotated locations for WP_012711883.1

    UniProtKB/Swiss-Prot
    A0A8F5BL58, B8YB60, C3MRK1, C3MY97, C3MZM6, C3N7P8, C3NFS5, C4KIV6
    UniProtKB/TrEMBL
    A0A8F5BXY8, D2PDL4, F0NBR9, F0NKT2, M9UAU8
    Conserved Domains (1) summary
    PRK09570
    Location:6 → 84
    rpoH; DNA-directed RNA polymerase subunit H; Reviewed
Nucleotide Protein
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