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J5U23_RS00425 DNA-directed RNA polymerase subunit B [ Saccharolobus shibatae B12 ]

Gene ID: 65561652, updated on 31-Jan-2024

Summary

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Gene symbol
J5U23_RS00425
Gene description
DNA-directed RNA polymerase subunit B
Locus tag
J5U23_RS00425
Gene type
protein coding
Organism
Saccharolobus shibatae B12 (strain: B12, type-material: type strain of Sulfolobus shibatae)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus
Old locus tag
J5U23_00030
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Genomic context

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NZ_CP077717.1Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L24e Neighboring gene nucleoside-diphosphate kinase Neighboring gene translation initiation factor IF-2 Neighboring gene DNA-directed RNA polymerase subunit H Neighboring gene DNA-directed RNA polymerase subunit A' Neighboring gene DNA-directed RNA polymerase subunit A'' Neighboring gene 50S ribosomal protein L30e

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP077717.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural and functional analyses of the interaction of archaeal RNA polymerase with DNA. Wojtas MN, et al. Nucleic Acids Res, 2012 Oct. PMID 22848102, Free PMC Article
  2. Archaeal RNA polymerase: the influence of the protruding stalk in crystal packing and preliminary biophysical analysis of the Rpo13 subunit. Wojtas M, et al. Biochem Soc Trans, 2011 Jan. PMID 21265742
  3. Evolution of complex RNA polymerases: the complete archaeal RNA polymerase structure. Korkhin Y, et al. PLoS Biol, 2009 May. PMID 19419240, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DNA-directed RNA polymerase subunit B
WP_218258962.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP077717.1 Reference assembly

    Range
    25902..29297
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_218258962.1 DNA-directed RNA polymerase subunit B [Saccharolobus shibatae]

    UniProtKB/TrEMBL
    A0A8F5BRZ9
    Conserved Domains (1) summary
    PRK08565
    Location:13 → 1122
    PRK08565; DNA-directed RNA polymerase subunit B; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
4V8S_b.1