Format

Send to:

Choose Destination

Utp3 UTP3 small subunit processome component [ Mus musculus (house mouse) ]

Gene ID: 65961, updated on 23-Jun-2021

Summary

Official Symbol
Utp3provided by MGI
Official Full Name
UTP3 small subunit processome componentprovided by MGI
Primary source
MGI:MGI:1919230
See related
Ensembl:ENSMUSG00000070697
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Crl; Crl1; Crl-1; Crlz1; Sas10; C87704; AW557551; 2400011K09Rik
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Utp3 in Genome Data Viewer
Location:
5; 5 E1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88702321..88703949)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (88554462..88556090)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88983508..88985108)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene enamelin Neighboring gene immunoglobulin joining chain Neighboring gene predicted gene, 42107 Neighboring gene RUN and FYVE domain containing 3 Neighboring gene G-rich RNA sequence binding factor 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IPI
Inferred from Physical Interaction
more info
PubMed 
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
something about silencing protein 10
Names
UTP3 homolog
charged amino acid-rich leucine zipper 1
disrupter of silencing SAS10

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023054.2NP_075541.1  something about silencing protein 10

    See identical proteins and their annotated locations for NP_075541.1

    Status: VALIDATED

    Source sequence(s)
    AK145637, BF458645
    Consensus CDS
    CCDS19402.1
    UniProtKB/Swiss-Prot
    Q9JI13
    Related
    ENSMUSP00000087896.5, ENSMUST00000090413.6
    Conserved Domains (2) summary
    pfam04000
    Location:226305
    Sas10_Utp3; Sas10/Utp3/C1D family
    pfam09368
    Location:398468
    Sas10; Sas10 C-terminal domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    88702321..88703949
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center