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Emc3 ER membrane protein complex subunit 3 [ Mus musculus (house mouse) ]

Gene ID: 66087, updated on 23-Jun-2021

Summary

Official Symbol
Emc3provided by MGI
Official Full Name
ER membrane protein complex subunit 3provided by MGI
Primary source
MGI:MGI:1913337
See related
Ensembl:ENSMUSG00000030286
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pob; Tmem111; AI225901; AW260416; 0610039A15Rik
Expression
Ubiquitous expression in bladder adult (RPKM 30.4), subcutaneous fat pad adult (RPKM 27.8) and 28 other tissues See more
Orthologs
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Genomic context

See Emc3 in Genome Data Viewer
Location:
6; 6 E3
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (113491848..113508599, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (113514887..113531638, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (113464881..113481632, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich with EGF-like domains 1 Neighboring gene proline-rich transmembrane protein 3 Neighboring gene Fanconi anemia, complementation group D2 Neighboring gene predicted gene, 46971 Neighboring gene predicted gene, 38874

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
contributes_to membrane insertase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of EMC complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of EMC complex ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ER membrane protein complex subunit 3
Names
partial optokinetic response b
transmembrane protein 111

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175101.3NP_780310.1  ER membrane protein complex subunit 3

    See identical proteins and their annotated locations for NP_780310.1

    Status: PROVISIONAL

    Source sequence(s)
    AK075595
    Consensus CDS
    CCDS20425.1
    UniProtKB/Swiss-Prot
    Q99KI3
    Related
    ENSMUSP00000032425.6, ENSMUST00000032425.7
    Conserved Domains (1) summary
    pfam01956
    Location:5190
    DUF106; Integral membrane protein DUF106

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    113491848..113508599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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