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Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 [ Mus musculus (house mouse) ]

Gene ID: 66108, updated on 23-Jun-2021

Summary

Official Symbol
Ndufa9provided by MGI
Official Full Name
NADH:ubiquinone oxidoreductase subunit A9provided by MGI
Primary source
MGI:MGI:1913358
See related
Ensembl:ENSMUSG00000000399
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1010001N11Rik
Expression
Ubiquitous expression in heart adult (RPKM 197.9), kidney adult (RPKM 121.9) and 28 other tissues See more
Orthologs
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Genomic context

See Ndufa9 in Genome Data Viewer
Location:
6; 6 F3
Exon count:
11
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (126798826..126826107, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (126821863..126849144, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (126771881..126799162, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 20190 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 8 pseudogene Neighboring gene RIKEN cDNA 1700018A23 gene Neighboring gene A kinase (PRKA) anchor protein 3 Neighboring gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables NADH dehydrogenase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-containing complex binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
PubMed 
Process Evidence Code Pubs
involved_in circadian rhythm ISO
Inferred from Sequence Orthology
more info
 
involved_in mitochondrial respiratory chain complex I assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in ubiquinone-6 biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane HDA PubMed 
located_in mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrial membrane ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial respiratory chain complex I IDA
Inferred from Direct Assay
more info
PubMed 
part_of mitochondrial respiratory chain complex I ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in respirasome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial
Names
CI-39kD
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9
NADH-ubiquinone oxidoreductase 39 kDa subunit
complex I-39kD
NP_079634.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025358.3NP_079634.2  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial precursor

    See identical proteins and their annotated locations for NP_079634.2

    Status: VALIDATED

    Source sequence(s)
    AC165085, AK012366
    Consensus CDS
    CCDS20557.1
    UniProtKB/Swiss-Prot
    Q9DC69
    Related
    ENSMUSP00000144904.2, ENSMUST00000205002.3
    Conserved Domains (1) summary
    cd05271
    Location:54326
    NDUFA9_like_SDR_a; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    126798826..126826107 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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