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Prxl2c peroxiredoxin like 2C [ Mus musculus (house mouse) ]

Gene ID: 66129, updated on 16-Oct-2021

Summary

Official Symbol
Prxl2cprovided by MGI
Official Full Name
peroxiredoxin like 2Cprovided by MGI
Primary source
MGI:MGI:1913379
See related
Ensembl:ENSMUSG00000021482
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Aaed1; AI849003; 1110018J18Rik
Expression
Ubiquitous expression in lung adult (RPKM 20.0), liver adult (RPKM 19.8) and 28 other tissues See more
Orthologs
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Genomic context

See Prxl2c in Genome Data Viewer
Location:
13; 13 B3
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (64437612..64460524, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (64289798..64312710, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (64393144..64414018, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene CDC14 cell division cycle 14B Neighboring gene predicted gene, 46424 Neighboring gene RIKEN cDNA 1810034E14 gene Neighboring gene predicted gene, 31128 Neighboring gene cathepsin L

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables antioxidant activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERK1 and ERK2 cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of glycolytic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
peroxiredoxin-like 2C
Names
AhpC/TSA antioxidant enzyme domain containing 1
UPF0308 protein C9orf21 homolog
ahpC/TSA antioxidant enzyme domain-containing protein 1
thioredoxin-like protein AAED1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025370.3NP_079646.1  peroxiredoxin-like 2C

    See identical proteins and their annotated locations for NP_079646.1

    Status: VALIDATED

    Source sequence(s)
    AK003782, AK145867, AK168701, CT030159
    Consensus CDS
    CCDS26599.1
    UniProtKB/Swiss-Prot
    Q9D1A0
    Related
    ENSMUSP00000152323.2, ENSMUST00000222570.2
    Conserved Domains (1) summary
    cd02970
    Location:34195
    PRX_like2; Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    64437612..64460524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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