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Krt88 keratin 88 [ Mus musculus (house mouse) ]

Gene ID: 66322, updated on 23-Jun-2021

Summary

Official Symbol
Krt88provided by MGI
Official Full Name
keratin 88provided by MGI
Primary source
MGI:MGI:1913572
See related
Ensembl:ENSMUSG00000063971
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700011A15Rik
Expression
Restricted expression toward testis adult (RPKM 59.2) See more
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Genomic context

See Krt88 in Genome Data Viewer
Location:
15; 15 F2
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101345605..101351806)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101447724..101453925)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101278176..101284340)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene keratin 7 Neighboring gene keratin 87 Neighboring gene keratin 81 Neighboring gene keratin 86

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC66322

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025487.3NP_079763.1  uncharacterized protein LOC66322

    See identical proteins and their annotated locations for NP_079763.1

    Status: VALIDATED

    Source sequence(s)
    BB019987, BC048463, CN841812
    Consensus CDS
    CCDS37217.1
    UniProtKB/TrEMBL
    Q9CPR6
    Related
    ENSMUSP00000023781.8, ENSMUST00000023781.9
    Conserved Domains (1) summary
    pfam00038
    Location:3109
    Filament; Intermediate filament protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    101345605..101351806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006521258.4XP_006521321.1  uncharacterized protein LOC66322 isoform X1

    Conserved Domains (1) summary
    pfam00038
    Location:1113
    Filament; Intermediate filament protein
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