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Potefam3d POTE ankyrin domain family member 3D [ Mus musculus (house mouse) ]

Gene ID: 665578, updated on 8-Feb-2024

Summary

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Official Symbol
Potefam3dprovided by MGI
Official Full Name
POTE ankyrin domain family member 3Dprovided by MGI
Primary source
MGI:MGI:3649141
See related
Ensembl:ENSMUSG00000106824 AllianceGenome:MGI:3649141
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm7697; Pote3d; EG665578
Expression
Restricted expression toward testis adult (RPKM 22.4) See more
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Genomic context

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Location:
8 B3.3; 8 33.88 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (69926245..69975576, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (69473593..69522924, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene 10033 Neighboring gene STARR-seq mESC enhancer starr_21735 Neighboring gene POTE ankyrin domain family member 3C Neighboring gene STARR-positive B cell enhancer mm9_chr8:71994362-71994663 Neighboring gene STARR-seq mESC enhancer starr_21736 Neighboring gene STARR-seq mESC enhancer starr_21738 Neighboring gene ribosomal protein S7, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_21739 Neighboring gene STARR-positive B cell enhancer mm9_chr8:72085257-72085558 Neighboring gene STARR-positive B cell enhancer mm9_chr8:72095951-72096251 Neighboring gene STARR-positive B cell enhancer mm9_chr8:72098669-72098969 Neighboring gene cadherin 11 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 7-like; putative POTE ankyrin domain family member M

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    69926245..69975576 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_977914.8 → XP_983008.3  putative POTE ankyrin domain family member M isoform X1

    UniProtKB/TrEMBL
    A0A0J9YUH2, B9EK96
    Related
    ENSMUSP00000144181.2, ENSMUST00000201500.2
    Conserved Domains (2) summary
    sd00045
    Location:86 → 115
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:89 → 180
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_036154429.1 → XP_036010322.1  ankyrin repeat domain-containing protein 7-like isoform X3

    UniProtKB/TrEMBL
    Q9D5C0
    Conserved Domains (2) summary
    sd00045
    Location:86 → 115
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:89 → 180
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_036154428.1 → XP_036010321.1  ankyrin repeat domain-containing protein 7-like isoform X2

    UniProtKB/TrEMBL
    Q9D5C0
    Conserved Domains (2) summary
    sd00045
    Location:86 → 115
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:89 → 180
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein Strain
Heading Accession and Version

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