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Gm12657 predicted gene 12657 [ Mus musculus (house mouse) ]

Gene ID: 667250, updated on 23-Jun-2021

Summary

Official Symbol
Gm12657provided by MGI
Official Full Name
predicted gene 12657provided by MGI
Primary source
MGI:MGI:3651714
Gene type
protein coding
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H3mm12
Expression
Biased expression in ovary adult (RPKM 34.3), duodenum adult (RPKM 7.5) and 1 other tissue See more
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Genomic context

See Gm12657 in Genome Data Viewer
Location:
4; 4 C5
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (94481887..94488556)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (94593650..94600319)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (94260341..94267010)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12656 Neighboring gene caspase activity and apoptosis inhibitor 1 Neighboring gene phospholipase A2, activating protein Neighboring gene intraflagellar transport 74 Neighboring gene leucine rich repeat containing 19 Neighboring gene microRNA 872

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

  • Homologs of the Gm12657 gene: The Gm12657 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, chicken, zebrafish, fruit fly, C.elegans, S.cerevisiae, E.gossypii, S.pombe, M.oryzae, N.crassa, and frog.
  • Orthologs

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081019.1NP_001074488.1  predicted gene 12657

    See identical proteins and their annotated locations for NP_001074488.1

    Status: INFERRED

    Source sequence(s)
    AL732597
    Conserved Domains (2) summary
    PTZ00018
    Location:1136
    PTZ00018; histone H3; Provisional
    pfam00125
    Location:1132
    Histone; Core histone H2A/H2B/H3/H4

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    94481887..94488556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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