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LOC6729868 myosin light chain alkali [ Drosophila simulans ]

Gene ID: 6729868, updated on 15-Sep-2023

Summary

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Gene symbol
LOC6729868
Gene description
myosin light chain alkali
Locus tag
Dsimw501_GD18066
See related
EnsemblRapid:LOC6729868
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Mlc1; Mlc-1; GD18066; Mlc1-PA; Mlc1-PB; Dsim\Mlc1; GD18066-PA; GD18066-PB
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Genomic context

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Location:
chromosome: 3R
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 3R NC_052523.2 (23827737..23830591, complement)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 3R NC_052523.1 (23827970..23830631, complement)

Chromosome 3R - NC_052523.2Genomic Context describing neighboring genes Neighboring gene ras-related C3 botulinum toxin substrate 1 Neighboring gene microtubule-associated protein tau Neighboring gene 40S ribosomal protein S10a Neighboring gene protein unc-80 homolog Neighboring gene hydroxysteroid dehydrogenase-like protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution of P transposable elements in the genus Drosophila. I. The saltans and willistoni species groups. Clark JB, et al. Mol Biol Evol, 1995 Sep. PMID 7476136
  2. Length variation and secondary structure of introns in the Mlc1 gene in six species of Drosophila. Clark AG, et al. Mol Biol Evol, 1996 Mar. PMID 8742636
  3. Conservation of alternative splicing and genomic organization of the myosin alkali light-chain (Mlc1) gene among Drosophila species. Leicht BG, et al. Mol Biol Evol, 1993 Jul. PMID 8355600
  4. Within- and between-species DNA sequence variation and the 'footprint' of natural selection. Akashi H. Gene, 1999 Sep 30. PMID 10570982
  5. Inferring the fitness effects of DNA mutations from polymorphism and divergence data: statistical power to detect directional selection under stationarity and free recombination. Akashi H. Genetics, 1999 Jan. PMID 9872962, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of muscle myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin light chain alkali
Names
Dsim\GD18066
Dsim\GD18066-PA
Dsim\GD18066-PB
Dsim\Mlc1-PA
Dsim\Mlc1-PB
dsim_GLEANR_1895
myosin alkali light chain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052523.2 Reference Prin_Dsim_3.1

    Range
    23827737..23830591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016174553.3 → XP_016036618.1  myosin light chain alkali isoform X2

    UniProtKB/Swiss-Prot
    Q24654
    Related
    XP_016036618.1, XM_016174553.3
    Conserved Domains (1) summary
    COG5126
    Location:26 → 152
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_016174552.3 → XP_016036617.1  myosin light chain alkali isoform X1

    UniProtKB/Swiss-Prot
    B4QY26, Q24653, Q24654, Q24657, Q24659, Q27299, Q27429
    Related
    XP_016036617.1, XM_016174552.3
    Conserved Domains (1) summary
    COG5126
    Location:26 → 151
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q24654.3 GenPept UniProtKB/Swiss-Prot:Q24654

Gene LinkOut

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