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Pbld2 phenazine biosynthesis-like protein domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 67307, updated on 23-Jun-2021

Summary

Official Symbol
Pbld2provided by MGI
Official Full Name
phenazine biosynthesis-like protein domain containing 2provided by MGI
Primary source
MGI:MGI:1914557
See related
Ensembl:ENSMUSG00000020072
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mawbp; 3110049J23Rik
Expression
Biased expression in liver adult (RPKM 25.9), large intestine adult (RPKM 8.4) and 6 other tissues See more
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Genomic context

See Pbld2 in Genome Data Viewer
Location:
10; 10 B4
Exon count:
13
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (62856086..62894592)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (63024053..63058813)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (62487260..62521560)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene RUN and FYVE domain-containing 2 Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene predicted gene 16143 Neighboring gene phenazine biosynthesis-like protein domain containing 1 Neighboring gene atonal bHLH transcription factor 7

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (3) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
phenazine biosynthesis-like domain-containing protein 2
Names
MAWD binding protein homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026085.2NP_080361.1  phenazine biosynthesis-like domain-containing protein 2

    See identical proteins and their annotated locations for NP_080361.1

    Status: PROVISIONAL

    Source sequence(s)
    AK014198
    Consensus CDS
    CCDS23894.1
    UniProtKB/Swiss-Prot
    Q9CXN7
    Related
    ENSMUSP00000020262.5, ENSMUST00000020262.5
    Conserved Domains (1) summary
    cl29427
    Location:9284
    PhzC-PhzF; Phenazine biosynthesis-like protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    62856086..62894592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036155961.1XP_036011854.1  phenazine biosynthesis-like domain-containing protein 2 isoform X4

    Conserved Domains (1) summary
    cl29427
    Location:9284
    PhzC-PhzF; Phenazine biosynthesis-like protein
  2. XM_006513981.4XP_006514044.1  phenazine biosynthesis-like domain-containing protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006514044.1

    Conserved Domains (1) summary
    cl29427
    Location:70345
    PhzC-PhzF; Phenazine biosynthesis-like protein
  3. XM_006513982.5XP_006514045.1  phenazine biosynthesis-like domain-containing protein 2 isoform X2

    Conserved Domains (1) summary
    cl29427
    Location:63338
    PhzC-PhzF; Phenazine biosynthesis-like protein
  4. XM_006513983.2XP_006514046.1  phenazine biosynthesis-like domain-containing protein 2 isoform X3

    Conserved Domains (1) summary
    cl29427
    Location:46321
    PhzC-PhzF; Phenazine biosynthesis-like protein
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