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Lyzl1 lysozyme-like 1 [ Mus musculus (house mouse) ]

Gene ID: 67328, updated on 23-Jun-2021

Summary

Official Symbol
Lyzl1provided by MGI
Official Full Name
lysozyme-like 1provided by MGI
Primary source
MGI:MGI:1914578
See related
Ensembl:ENSMUSG00000024233
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Lyc2; Lyzd1; 1700038F02Rik
Expression
Restricted expression toward testis adult (RPKM 49.1) See more
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Genomic context

See Lyzl1 in Genome Data Viewer
Location:
18; 18 A1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (4165832..4182236)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (4165832..4182236)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (4165830..4182234)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene rhomboid-related protein 2 pseudogene Neighboring gene polycomb group RING finger protein 4 pseudogene Neighboring gene cadherin 11 pseudogene Neighboring gene predicted gene, 41657

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
lysozyme-like protein 1
Names
lysozyme d1
lysozyme-like protein 2
NP_080368.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026092.3NP_080368.1  lysozyme-like protein 1 precursor

    See identical proteins and their annotated locations for NP_080368.1

    Status: PROVISIONAL

    Source sequence(s)
    AC123048
    Consensus CDS
    CCDS29035.1
    UniProtKB/Swiss-Prot
    Q9CPX3
    UniProtKB/TrEMBL
    A0A077S9Z4
    Related
    ENSMUSP00000025076.4, ENSMUST00000025076.10
    Conserved Domains (1) summary
    cd00119
    Location:20143
    LYZ1; C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA). They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    4165832..4182236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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