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LOC6737625 superoxide dismutase [Cu-Zn] [ Drosophila simulans ]

Gene ID: 6737625, updated on 3-Apr-2024

Summary

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Gene symbol
LOC6737625
Gene description
superoxide dismutase [Cu-Zn]
Locus tag
Dsimw501_GD12822
See related
EnsemblRapid:LOC6737625
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Cu; Sod; Sod1; SOD-1; Sod-PA; GD12822; Dsim\Sod; GD12822-PA
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Genomic context

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See LOC6737625 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 3L NC_052522.2 (10901343..10902942, complement)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 3L NC_052522.1 (10901343..10902944, complement)

Chromosome 3L - NC_052522.2Genomic Context describing neighboring genes Neighboring gene protein new-glue 1 Neighboring gene uncharacterized LOC6737623 Neighboring gene transmembrane protein 161B Neighboring gene probable serine/threonine-protein kinase tsuA Neighboring gene 39S ribosomal protein L2, mitochondrial Neighboring gene ubiquitin fusion degradation protein 1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a Cu/Zn superoxide dismutase-encoding gene region in Drosophila willistoni. Kwiatowski J, et al. Gene, 1994 Sep 30. PMID 7926818
  2. Molecular evolution of two linked genes, Est-6 and Sod, in Drosophila melanogaster. Balakirev ES, et al. Genetics, 1999 Nov. PMID 10545464, Free PMC Article
  3. Phylogeny of Drosophila and related genera inferred from the nucleotide sequence of the Cu,Zn Sod gene. Kwiatowski J, et al. J Mol Evol, 1994 May. PMID 7545938
  4. Erratic overdispersion of three molecular clocks: GPDH, SOD, and XDH. Rodríguez-Trelles F, et al. Proc Natl Acad Sci U S A, 2001 Sep 25. PMID 11553790, Free PMC Article
  5. Rapid evolution of a few members of nasuta-albomicans complex of Drosophila: study on two candidate genes, Sod1 and Rpd3. Ranjini MS, et al. J Mol Evol, 2013 May. PMID 23619741

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superoxide dismutase [Cu-Zn]
Names
Dsim\GD12822
Dsim\GD12822-PA
Dsim\Sod-PA
Superoxide dismutase 1
Zn Sod
dsim_GLEANR_12880

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052522.2 Reference Prin_Dsim_3.1

    Range
    10901343..10902942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002084421.4 → XP_002084457.1  superoxide dismutase [Cu-Zn]

    See identical proteins and their annotated locations for XP_002084457.1

    UniProtKB/Swiss-Prot
    B4QPQ1, P61852
    UniProtKB/TrEMBL
    A0A0J9RT28, B8Q5E0
    Related
    XP_002084457.1, XM_002084421.4
    Conserved Domains (1) summary
    cl00891
    Location:2 → 150
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P61852.2 GenPept UniProtKB/Swiss-Prot:P61852

Gene LinkOut

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