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Tex46 testis expressed 46 [ Mus musculus (house mouse) ]

Gene ID: 67663, updated on 23-Jun-2021

Summary

Official Symbol
Tex46provided by MGI
Official Full Name
testis expressed 46provided by MGI
Primary source
MGI:MGI:1914913
See related
Ensembl:ENSMUSG00000036921
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930549C01Rik
Expression
Restricted expression toward testis adult (RPKM 11.3) See more
Orthologs
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Genomic context

See Tex46 in Genome Data Viewer
Location:
4; 4 D3
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (136334313..136340590)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (136607091..136613279)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (136166352..136169128)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine (serotonin) receptor 1D Neighboring gene leucine zipper protein 1 Neighboring gene lysine (K)-specific demethylase 1A Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene lactamase, beta-like 1 Neighboring gene Eph receptor B2 Neighboring gene VISTA enhancer mm1494

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
testis-expressed protein 46

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026300.2NP_080576.1  testis-expressed protein 46

    See identical proteins and their annotated locations for NP_080576.1

    Status: PROVISIONAL

    Source sequence(s)
    AK016074
    Consensus CDS
    CCDS18808.1
    UniProtKB/TrEMBL
    Q9CPU3
    Related
    ENSMUSP00000038976.3, ENSMUST00000046647.3
    Conserved Domains (1) summary
    pfam17671
    Location:11161
    DUF5531; Family of unknown function (DUF5531)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    136334313..136340590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011250327.4XP_011248629.1  testis-expressed protein 46 isoform X1

    Conserved Domains (1) summary
    pfam17671
    Location:56149
    DUF5531; Family of unknown function (DUF5531)
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