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Fbxo32 F-box protein 32 [ Mus musculus (house mouse) ]

Gene ID: 67731, updated on 6-May-2021

Summary

Official Symbol
Fbxo32provided by MGI
Official Full Name
F-box protein 32provided by MGI
Primary source
MGI:MGI:1914981
See related
Ensembl:ENSMUSG00000022358
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ATR; MAFb; atro; MAFbx; Gm20361; AI430017; ATROGIN1; 4833442G10Rik
Expression
Broad expression in bladder adult (RPKM 14.0), colon adult (RPKM 13.9) and 20 other tissues See more
Orthologs
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Genomic context

See Fbxo32 in Genome Data Viewer
Location:
15; 15 D1
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (58039275..58078288, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (58175879..58214892, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (58011634..58046433, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23475 Neighboring gene WDYHV motif containing 1 Neighboring gene predicted gene, 22488 Neighboring gene predicted gene, 36112 Neighboring gene predicted gene, 36193 Neighboring gene kelch-like 38

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of SCF ubiquitin ligase complex ISO
Inferred from Sequence Orthology
more info
 
located_in Z disc IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
F-box only protein 32
Names
atrogin 1
muscle atrophy F-box protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026346.3NP_080622.1  F-box only protein 32

    See identical proteins and their annotated locations for NP_080622.1

    Status: VALIDATED

    Source sequence(s)
    AC113292, AK014793, BU921446
    Consensus CDS
    CCDS27491.1
    UniProtKB/Swiss-Prot
    Q9CPU7
    Related
    ENSMUSP00000022986.7, ENSMUST00000022986.8
    Conserved Domains (1) summary
    pfam06881
    Location:257302
    Elongin_A; RNA polymerase II transcription factor SIII (Elongin) subunit A

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    58039275..58078288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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