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SNORA37 small nucleolar RNA, H/ACA box 37 [ Homo sapiens (human) ]

Gene ID: 677819, updated on 10-Oct-2023

Summary

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Official Symbol
SNORA37provided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 37provided by HGNC
Primary source
HGNC:HGNC:32630
See related
Ensembl:ENSG00000207233 AllianceGenome:HGNC:32630
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACA37
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Genomic context

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See SNORA37 in Genome Data Viewer
Location:
18q21.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (54222284..54222412, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (54425359..54425487, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (51748654..51748782, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904304 Neighboring gene long intergenic non-protein coding RNA 1919 Neighboring gene long intergenic non-protein coding RNA 1917 Neighboring gene ribosomal protein L29 pseudogene 32 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:51309208-51310407 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:51377120-51377889 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_48020 Neighboring gene NANOG hESC enhancer GRCh37_chr18:51595986-51596496 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13338 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:51650065-51650829 Neighboring gene Sharpr-MPRA regulatory region 14779 Neighboring gene NANOG hESC enhancer GRCh37_chr18:51653946-51654503 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13341 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13340 Neighboring gene MPRA-validated peak3156 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9470 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:51751880-51752422 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:51752423-51752963 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13342 Neighboring gene methyl-CpG binding domain protein 2 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr18:51772851-51773736 Neighboring gene uncharacterized LOC124904306 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:51773737-51774623 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9471 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:51779086-51779588 Neighboring gene uncharacterized LOC124904307 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13343 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13344 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9472 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13346 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13345 Neighboring gene DNA polymerase iota

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. Lestrade L, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381836, Free PMC Article
  2. Human box H/ACA pseudouridylation guide RNA machinery. Kiss AM, et al. Mol Cell Biol, 2004 Jul. PMID 15199136, Free PMC Article
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. Dieci G, et al. Genomics, 2009 Aug. PMID 19446021

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Other Names

  • ACA37 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002970.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AJ609444
    Related
    ENST00000384504.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    54222284..54222412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    54425359..54425487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases