Format

Send to:

Choose Destination

Ccdc70 coiled-coil domain containing 70 [ Mus musculus (house mouse) ]

Gene ID: 67929, updated on 23-Jun-2021

Summary

Official Symbol
Ccdc70provided by MGI
Official Full Name
coiled-coil domain containing 70provided by MGI
Primary source
MGI:MGI:1915179
See related
Ensembl:ENSMUSG00000017049
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700112P19Rik
Expression
Restricted expression toward testis adult (RPKM 22.2) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Ccdc70 in Genome Data Viewer
Location:
8; 8 A2
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (22459791..22464071)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (21969775..21974055)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (23081068..23084513)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 29821 Neighboring gene defensin beta 13 Neighboring gene family with sequence similarity 90, member A1A Neighboring gene ATPase, Cu++ transporting, beta polypeptide Neighboring gene asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 70

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357224.1NP_001344153.1  coiled-coil domain-containing protein 70 precursor

    Status: VALIDATED

    Source sequence(s)
    AK007190, BB017038
    Consensus CDS
    CCDS22167.1
    Related
    ENSMUSP00000069249.2, ENSMUST00000070649.2
  2. NM_026459.4NP_080735.1  coiled-coil domain-containing protein 70 precursor

    See identical proteins and their annotated locations for NP_080735.1

    Status: VALIDATED

    Source sequence(s)
    AL590619
    Consensus CDS
    CCDS22167.1
    UniProtKB/Swiss-Prot
    Q9D9B0
    Related
    ENSMUSP00000017193.2, ENSMUST00000017193.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    22459791..22464071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006509182.1XP_006509245.1  coiled-coil domain-containing protein 70 isoform X1

    See identical proteins and their annotated locations for XP_006509245.1

    UniProtKB/Swiss-Prot
    Q9D9B0
Support Center