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Mid1ip1 Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) [ Mus musculus (house mouse) ]

Gene ID: 68041, updated on 5-Jan-2022

Summary

Official Symbol
Mid1ip1provided by MGI
Official Full Name
Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))provided by MGI
Primary source
MGI:MGI:1915291
See related
Ensembl:ENSMUSG00000008035
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
S14R; Mig12; 3110038L01Rik
Summary
Enables identical protein binding activity and protein C-terminus binding activity. Involved in positive regulation of fatty acid biosynthetic process; positive regulation of ligase activity; and protein polymerization. Acts upstream of or within negative regulation of microtubule depolymerization. Located in cytosol; microtubule cytoskeleton; and nucleus. Is expressed in several structures, including adipose tissue; alimentary system; genitourinary system; limb segment; and nervous system. Orthologous to human MID1IP1 (MID1 interacting protein 1). [provided by Alliance of Genome Resources, Nov 2021]
Expression
Ubiquitous expression in genital fat pad adult (RPKM 87.4), lung adult (RPKM 68.5) and 26 other tissues See more
Orthologs
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Genomic context

See Mid1ip1 in Genome Data Viewer
Location:
X; X A1.1
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (10583604..10585941)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (10717365..10719702)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (10294491..10296828)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene lactate dehydrogenase A pseudogene Neighboring gene calmodulin 2 pseudogene Neighboring gene predicted gene, 33984 Neighboring gene predicted gene, 39494

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein C-terminus binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
mid1-interacting protein 1
Names
gastrulation-specific G12-like protein
mid1-interacting G12-like protein
protein STRAIT11499 homolog
spot 14-R
spot 14-related protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166635.1NP_001160107.1  mid1-interacting protein 1

    See identical proteins and their annotated locations for NP_001160107.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AL671335
    Consensus CDS
    CCDS30018.1
    UniProtKB/Swiss-Prot
    Q9CQ20
    UniProtKB/TrEMBL
    Q4FK31
    Related
    ENSMUSP00000111186.2, ENSMUST00000115524.8
    Conserved Domains (1) summary
    pfam07084
    Location:3176
    Spot_14; Thyroid hormone-inducible hepatic protein Spot 14
  2. NM_026524.4NP_080800.1  mid1-interacting protein 1

    See identical proteins and their annotated locations for NP_080800.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses a different splice site in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AL671335
    Consensus CDS
    CCDS30018.1
    UniProtKB/Swiss-Prot
    Q9CQ20
    UniProtKB/TrEMBL
    Q4FK31
    Related
    ENSMUSP00000008179.7, ENSMUST00000008179.7
    Conserved Domains (1) summary
    pfam07084
    Location:3176
    Spot_14; Thyroid hormone-inducible hepatic protein Spot 14

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    10583604..10585941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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