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Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 [ Mus musculus (house mouse) ]

Gene ID: 68197, updated on 16-Apr-2024

Summary

Official Symbol
Ndufc2provided by MGI
Official Full Name
NADH:ubiquinone oxidoreductase subunit C2provided by MGI
Primary source
MGI:MGI:1344370
See related
Ensembl:ENSMUSG00000030647 AllianceGenome:MGI:1344370
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
G1; 1810004I06Rik; 2010300P09Rik
Summary
Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in several processes, including mitochondrial respiratory chain complex I assembly; negative regulation of NIK/NF-kappaB signaling; and positive regulation of ATP biosynthetic process. Located in mitochondrial inner membrane. Is expressed in several structures, including gut; male reproductive gland or organ; and nervous system. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency. Orthologous to several human genes including NDUFC2 (NADH:ubiquinone oxidoreductase subunit C2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in kidney adult (RPKM 105.2), adrenal adult (RPKM 98.1) and 28 other tissues See more
Orthologs
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Genomic context

Location:
7 E1; 7 53.49 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (97049210..97057007)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (97400003..97407800)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr7:104480601-104480902 Neighboring gene potassium channel tetramerisation domain containing 21 Neighboring gene STARR-seq mESC enhancer starr_19591 Neighboring gene STARR-positive B cell enhancer ABC_E9293 Neighboring gene ALG8 alpha-1,3-glucosyltransferase Neighboring gene STARR-seq mESC enhancer starr_19594 Neighboring gene thyroid hormone responsive Neighboring gene predicted gene, 32945

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (3) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane HDA PubMed 
located_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial respiratory chain complex I IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial respiratory chain complex I ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in respirasome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
NADH dehydrogenase [ubiquinone] 1 subunit C2
Names
14.5b subunit of the NADH-ubiquinone dehydrogenase complex
CI-B14.5b
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2
NADH-ubiquinone oxidoreductase subunit B14.5b
complex I-B14.5b
NP_077182.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024220.2NP_077182.1  NADH dehydrogenase [ubiquinone] 1 subunit C2

    See identical proteins and their annotated locations for NP_077182.1

    Status: VALIDATED

    Source sequence(s)
    AI413456, CK128102
    Consensus CDS
    CCDS21457.1
    UniProtKB/Swiss-Prot
    Q3TLB2, Q9CQ54
    UniProtKB/TrEMBL
    Q9D846
    Related
    ENSMUSP00000032882.9, ENSMUST00000032882.9
    Conserved Domains (1) summary
    pfam06374
    Location:11120
    NDUF_C2; NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    97049210..97057007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)