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Trmt12 tRNA methyltransferase 12 [ Mus musculus (house mouse) ]

Gene ID: 68260, updated on 23-Jun-2021

Summary

Official Symbol
Trmt12provided by MGI
Official Full Name
tRNA methyltransferase 12provided by MGI
Primary source
MGI:MGI:1915510
See related
Ensembl:ENSMUSG00000037085
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tyw2; AI449275; 4632406N01Rik
Orthologs
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Genomic context

See Trmt12 in Genome Data Viewer
Location:
15; 15 D1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (58744498..58748630)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (58872649..58876781)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (58704204..58708336)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41329 Neighboring gene transmembrane protein 65 Neighboring gene predicted gene, 24041 Neighboring gene predicted gene, 36509 Neighboring gene ring finger protein 139 Neighboring gene TatD DNase domain containing 1

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables tRNA methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in tRNA methylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within tRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
tRNA wybutosine-synthesizing protein 2 homolog
Names
alpha-amino-alpha-carboxypropyl transferase TYW2
tRNA methyltranferase 12 homolog
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase
tRNA-yW-synthesizing protein 2
NP_080918.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026642.2NP_080918.2  tRNA wybutosine-synthesizing protein 2 homolog

    See identical proteins and their annotated locations for NP_080918.2

    Status: VALIDATED

    Source sequence(s)
    AC107772
    Consensus CDS
    CCDS37081.1
    UniProtKB/Swiss-Prot
    Q8BG71
    Related
    ENSMUSP00000047831.8, ENSMUST00000036937.9
    Conserved Domains (2) summary
    COG0270
    Location:228313
    Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
    pfam02475
    Location:122324
    Met_10; Met-10+ like-protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    58744498..58748630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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