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Fam114a1 family with sequence similarity 114, member A1 [ Mus musculus (house mouse) ]

Gene ID: 68303, updated on 23-Jun-2021

Summary

Official Symbol
Fam114a1provided by MGI
Official Full Name
family with sequence similarity 114, member A1provided by MGI
Primary source
MGI:MGI:1915553
See related
Ensembl:ENSMUSG00000029185
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Noxp20; 1190001N04Rik; 9130005N14Rik
Expression
Broad expression in bladder adult (RPKM 26.5), limb E14.5 (RPKM 22.0) and 26 other tissues See more
Orthologs
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Genomic context

See Fam114a1 in Genome Data Viewer
Location:
5; 5 C3.1
Exon count:
14
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (65127418..65199244)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (64970075..65041901)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (65361314..65433140)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene toll-like receptor 1 pseudogene Neighboring gene toll-like receptor 1 Neighboring gene toll-like receptor 6 Neighboring gene microRNA 574 Neighboring gene predicted gene, 32374 Neighboring gene transmembrane protein 156 Neighboring gene kelch-like 5 Neighboring gene predicted gene, 54287

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC117924

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
protein Noxp20
Names
nervous system over-expressed protein 20
nervous system overexpressed protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026667.3NP_080943.3  protein Noxp20

    See identical proteins and their annotated locations for NP_080943.3

    Status: VALIDATED

    Source sequence(s)
    AK020262, AK030360, BB404234
    Consensus CDS
    CCDS19304.1
    UniProtKB/Swiss-Prot
    Q9D281
    Related
    ENSMUSP00000031080.9, ENSMUST00000031080.15
    Conserved Domains (1) summary
    pfam05334
    Location:126300
    DUF719; Protein of unknown function (DUF719)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    65127418..65199244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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