U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ppp1r26 protein phosphatase 1, regulatory subunit 26 [ Rattus norvegicus (Norway rat) ]

Gene ID: 685398, updated on 13-Apr-2024

Summary

Go to the top of the page Help
Symbol
Ppp1r26provided by RGD
Full Name
protein phosphatase 1, regulatory subunit 26provided by RGD
Primary source
RGD:1595050
See related
Ensembl:ENSRNOG00000027193 AllianceGenome:RGD:1595050
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
AABR07051376.1
Summary
Orthologous to human PPP1R26 (protein phosphatase 1 regulatory subunit 26). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Adrenal (RPKM 112.5), Brain (RPKM 77.4) and 9 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Ppp1r26 in Genome Data Viewer
Location:
3p12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (32179686..32188069)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (11781504..11790076)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (7032118..7040615)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene Microtubule-associated proteins 1A/1B light chain 3B-like Neighboring gene uncharacterized LOC134486352 Neighboring gene piercer of microtubule wall 1 Neighboring gene mitochondrial ribosomal protein S2 Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Docking motif-guided mapping of the interactome of protein phosphatase-1. Hendrickx A, et al. Chem Biol, 2009 Apr 24. PMID 19389623
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables protein phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
protein phosphatase 1 regulatory subunit 26
Names
rCG45515-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001427208.1 → NP_001414137.1  protein phosphatase 1 regulatory subunit 26

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    D3ZPW4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    32179686..32188069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039106150.2 → XP_038962078.1  protein phosphatase 1 regulatory subunit 26 isoform X1

    UniProtKB/TrEMBL
    A6JTN0, D3ZPW4
    Conserved Domains (1) summary
    pfam15740
    Location:1 → 808
    PPP1R26_N; Protein phosphatase 1 regulatory subunit 26 N-terminus

  2. XM_039106149.2 → XP_038962077.1  protein phosphatase 1 regulatory subunit 26 isoform X1

    UniProtKB/TrEMBL
    A6JTN0, D3ZPW4
    Related
    ENSRNOP00000078859.1
    Conserved Domains (1) summary
    pfam15740
    Location:1 → 808
    PPP1R26_N; Protein phosphatase 1 regulatory subunit 26 N-terminus

  3. XM_039106146.2 → XP_038962074.1  protein phosphatase 1 regulatory subunit 26 isoform X1

    UniProtKB/TrEMBL
    A6JTN0, D3ZPW4
    Conserved Domains (1) summary
    pfam15740
    Location:1 → 808
    PPP1R26_N; Protein phosphatase 1 regulatory subunit 26 N-terminus

  4. XM_063284559.1 → XP_063140629.1  protein phosphatase 1 regulatory subunit 26 isoform X1

    UniProtKB/TrEMBL
    D3ZPW4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous