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SNORD112 small nucleolar RNA, C/D box 112 [ Homo sapiens (human) ]

Gene ID: 692215, updated on 10-Oct-2023

Summary

Official Symbol
SNORD112provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 112provided by HGNC
Primary source
HGNC:HGNC:32777
See related
Ensembl:ENSG00000275662 MIM:613649; AllianceGenome:HGNC:32777
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
14q(0)
Summary
Small nucleolar RNAs (snoRNAs), like SNORD112, guide the formation of 2-prime O-methylation of ribosomal RNA (rRNA) and U small nuclear RNAs (snRNAs) through a specific RNA duplex at each modification site (Cavaille et al., 2002 [PubMed 12045206]).[supplied by OMIM, Nov 2010]
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Genomic context

Location:
14q32.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (100897920..100897996)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (95133350..95133426)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (101364257..101364333)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 13483 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33596 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33604 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:101357417-101357918 Neighboring gene retrotransposon Gag like 1 Neighboring gene microRNA 432 Neighboring gene microRNA 136 Neighboring gene maternally expressed 8, small nucleolar RNA host gene Neighboring gene microRNA 370 Neighboring gene small nucleolar RNA, C/D box 113-1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003080.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL117190
    Related
    ENST00000458974.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    100897920..100897996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    95133350..95133426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)