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Anxa13 annexin A13 [ Mus musculus (house mouse) ]

Gene ID: 69787, updated on 23-Jun-2021

Summary

Official Symbol
Anxa13provided by MGI
Official Full Name
annexin A13provided by MGI
Primary source
MGI:MGI:1917037
See related
Ensembl:ENSMUSG00000055114
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AV055219; 1810034H17Rik
Expression
Biased expression in large intestine adult (RPKM 22.5), small intestine adult (RPKM 5.4) and 2 other tissues See more
Orthologs
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Genomic context

See Anxa13 in Genome Data Viewer
Location:
15 D1; 15 24.66 cM
Exon count:
11
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (58204860..58261123, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (58341464..58389274, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (58173019..58220829, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36193 Neighboring gene kelch-like 38 Neighboring gene predicted gene, 53238 Neighboring gene family with sequence similarity 91, member A1 Neighboring gene fer-1-like 6 (C. elegans) Neighboring gene predicted gene, 36451

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables calcium-dependent phospholipid binding ISO
Inferred from Sequence Orthology
more info
 
enables phosphatidylglycerol binding ISO
Inferred from Sequence Orthology
more info
 
enables phosphatidylserine binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in extrinsic component of membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
annexin A13
Names
annexin XIII
annexin-13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027211.2NP_081487.1  annexin A13

    See identical proteins and their annotated locations for NP_081487.1

    Status: VALIDATED

    Source sequence(s)
    AJ306451, AV289596, BB617542
    UniProtKB/Swiss-Prot
    Q99JG3
    Related
    ENSMUSP00000159441.2, ENSMUST00000227274.3
    Conserved Domains (1) summary
    pfam00191
    Location:91156
    Annexin; Annexin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    58204860..58261123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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