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Ms4a10 membrane-spanning 4-domains, subfamily A, member 10 [ Mus musculus (house mouse) ]

Gene ID: 69826, updated on 23-Jun-2021

Summary

Official Symbol
Ms4a10provided by MGI
Official Full Name
membrane-spanning 4-domains, subfamily A, member 10provided by MGI
Primary source
MGI:MGI:1917076
See related
Ensembl:ENSMUSG00000024731
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010001N17Rik
Expression
Biased expression in duodenum adult (RPKM 138.7), small intestine adult (RPKM 67.1) and 1 other tissue See more
Orthologs
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Genomic context

See Ms4a10 in Genome Data Viewer
Location:
19; 19 A
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (10939653..10952088, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (10962289..10974724, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11036783..11049160, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene zona pellucida glycoprotein 1 Neighboring gene prostaglandin D2 receptor 2 Neighboring gene coiled-coil domain containing 86 Neighboring gene membrane-spanning 4-domains, subfamily A, member 15 Neighboring gene membrane-spanning 4-domains, subfamily A, member 18

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001379527.1NP_001366456.1  membrane-spanning 4-domains subfamily A member 10 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC148991
    Conserved Domains (1) summary
    pfam04103
    Location:57187
    CD20; CD20-like family
  2. NM_023529.3NP_076018.2  membrane-spanning 4-domains subfamily A member 10 isoform 1

    See identical proteins and their annotated locations for NP_076018.2

    Status: VALIDATED

    Source sequence(s)
    AC148991, AF237918
    Consensus CDS
    CCDS37919.1
    UniProtKB/Swiss-Prot
    Q99N03
    UniProtKB/TrEMBL
    B2RWS0
    Related
    ENSMUSP00000072531.7, ENSMUST00000072748.13
    Conserved Domains (1) summary
    pfam04103
    Location:57187
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    10939653..10952088 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527329.3XP_006527392.1  membrane-spanning 4-domains subfamily A member 10 isoform X1

    See identical proteins and their annotated locations for XP_006527392.1

    UniProtKB/Swiss-Prot
    Q99N03
    Related
    ENSMUSP00000140111.2, ENSMUST00000191343.7
  2. XM_011247338.2XP_011245640.1  membrane-spanning 4-domains subfamily A member 10 isoform X2

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