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IWS1 interacts with SUPT6H, CTD assembly factor 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 699205, updated on 5-Mar-2024

Summary

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Official Symbol
IWS1provided by VGNC
Official Full Name
interacts with SUPT6H, CTD assembly factor 1provided by VGNC
Primary source
VGNC:VGNC:73651
See related
Ensembl:ENSMMUG00000002799
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See IWS1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (3364365..3426940)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (3093476..3157219)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene LIM zinc finger domain containing 2 Neighboring gene G protein-coupled receptor 17 Neighboring gene myosin VIIB Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC114671496 Neighboring gene protein C, inactivator of coagulation factors Va and VIIIa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein IWS1 homolog
Names
IWS1, SUPT6H interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    3364365..3426940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015109841.2 → XP_014965327.2  protein IWS1 homolog isoform X2

    UniProtKB/TrEMBL
    H9ER08
    Conserved Domains (2) summary
    COG5271
    Location:20 → 522
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:432 → 770
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  2. XM_015109840.2 → XP_014965326.2  protein IWS1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5F8ALU2
    Conserved Domains (2) summary
    COG5271
    Location:54 → 457
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:433 → 771
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  3. XM_015109847.2 → XP_014965333.2  protein IWS1 homolog isoform X9

    UniProtKB/TrEMBL
    A0A1D5QAM6
    Conserved Domains (2) summary
    COG5271
    Location:54 → 457
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:433 → 724
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  4. XM_015109843.2 → XP_014965329.2  protein IWS1 homolog isoform X5

    UniProtKB/TrEMBL
    A0A5F8ALU2
    Related
    ENSMMUP00000078007.1, ENSMMUT00000091925.1
    Conserved Domains (2) summary
    COG5271
    Location:54 → 457
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:433 → 782
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  5. XM_015109842.2 → XP_014965328.2  protein IWS1 homolog isoform X3

    UniProtKB/TrEMBL
    H9ER08
    Conserved Domains (2) summary
    COG5271
    Location:54 → 457
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:433 → 797
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  6. XM_028830616.1 → XP_028686449.1  protein IWS1 homolog isoform X4

    UniProtKB/TrEMBL
    H9ER08
    Conserved Domains (2) summary
    COG5271
    Location:20 → 522
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:432 → 796
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  7. XM_015109848.2 → XP_014965334.2  protein IWS1 homolog isoform X9

    UniProtKB/TrEMBL
    A0A1D5QAM6
    Conserved Domains (2) summary
    COG5271
    Location:54 → 457
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:433 → 724
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  8. XM_015109846.2 → XP_014965332.2  protein IWS1 homolog isoform X8

    UniProtKB/TrEMBL
    A0A8J8Y7F9, G7NB48, H9ER08, H9ZB21
    Related
    ENSMMUP00000045094.2, ENSMMUT00000067761.2
    Conserved Domains (2) summary
    COG5271
    Location:49 → 452
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:428 → 792
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  9. XM_028830617.1 → XP_028686450.1  protein IWS1 homolog isoform X7

    UniProtKB/TrEMBL
    H9ER08
    Conserved Domains (2) summary
    COG5271
    Location:2 → 517
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:427 → 765
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  10. XM_015109845.2 → XP_014965331.2  protein IWS1 homolog isoform X6

    UniProtKB/TrEMBL
    A0A5F8ALU2
    Conserved Domains (2) summary
    COG5271
    Location:49 → 452
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:428 → 766
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  11. XM_028830618.1 → XP_028686451.1  protein IWS1 homolog isoform X10

    Conserved Domains (2) summary
    COG5271
    Location:3 → 313
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00146
    Location:221 → 585
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
Nucleotide Protein
Heading Accession and Version

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