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SUPT3H SPT3 homolog, SAGA and STAGA complex component [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703447, updated on 5-Mar-2024

Summary

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Official Symbol
SUPT3Hprovided by VGNC
Official Full Name
SPT3 homolog, SAGA and STAGA complex componentprovided by VGNC
Primary source
VGNC:VGNC:78055
See related
Ensembl:ENSMMUG00000021377
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SUPT3H in Genome Data Viewer
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (123983574..124510693)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (45946687..46477572, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677601 Neighboring gene chloride intracellular channel 5 Neighboring gene U6 spliceosomal RNA Neighboring gene RUNX family transcription factor 2 Neighboring gene pre-mRNA-splicing factor RBM22-like Neighboring gene microRNA mir-586 Neighboring gene uncharacterized LOC106997952 Neighboring gene cell division cycle 5 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation protein SPT3 homolog
Names
suppressor of Ty 3 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266569.1 → NP_001253498.1  transcription initiation protein SPT3 homolog

    See identical proteins and their annotated locations for NP_001253498.1

    Status: PROVISIONAL

    Source sequence(s)
    JV048467
    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Related
    ENSMMUP00000028158.4, ENSMMUT00000030088.4
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    123983574..124510693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028846740.1 → XP_028702573.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  2. XM_015136392.2 → XP_014991878.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  3. XM_028846738.1 → XP_028702571.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  4. XM_015136391.2 → XP_014991877.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  5. XM_028846735.1 → XP_028702568.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  6. XM_028846737.1 → XP_028702570.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  7. XM_028846736.1 → XP_028702569.1  transcription initiation protein SPT3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5K1VGN2, F7FHY4, H9G0V2
    Related
    ENSMMUP00000047924.2, ENSMMUT00000059024.2
    Conserved Domains (1) summary
    pfam02269
    Location:24 → 116
    TFIID-18kDa; Transcription initiation factor IID, 18kD subunit

  8. XM_028846739.1 → XP_028702572.1  transcription initiation protein SPT3 homolog isoform X2

    UniProtKB/TrEMBL
    A0A5K1VGN2
    Conserved Domains (1) summary
    cl02174
    Location:1 → 30
    TAF13; The TATA Binding Protein (TBP) Associated Factor 13 (TAF13) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
Nucleotide Protein
Heading Accession and Version

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