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CPEB4 cytoplasmic polyadenylation element binding protein 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704141, updated on 5-Mar-2024

Summary

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Official Symbol
CPEB4provided by VGNC
Official Full Name
cytoplasmic polyadenylation element binding protein 4provided by VGNC
Primary source
VGNC:VGNC:71450
Locus tag
EGK_17145
See related
Ensembl:ENSMMUG00000019926
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CPEB4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (171280062..171352297)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (172172282..172244821)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678975 Neighboring gene uncharacterized LOC106999043 Neighboring gene uncharacterized LOC114678974 Neighboring gene chromosome 6 C5orf47 homolog Neighboring gene uncharacterized protein C6orf203 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA regulatory element binding translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation factor activity, RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of messenger ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic polyadenylation element-binding protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    171280062..171352297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001097943.4 → XP_001097943.2  cytoplasmic polyadenylation element-binding protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZM15
    Related
    ENSMMUP00000066220.1, ENSMMUT00000109087.1
    Conserved Domains (3) summary
    pfam16366
    Location:638 → 699
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:455 → 546
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:563 → 643
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

  2. XM_001097847.4 → XP_001097847.3  cytoplasmic polyadenylation element-binding protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A1D5R7M6
    Related
    ENSMMUP00000056316.1, ENSMMUT00000078105.2
    Conserved Domains (3) summary
    pfam16366
    Location:630 → 691
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:447 → 538
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:555 → 635
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

  3. XM_001098122.4 → XP_001098122.2  cytoplasmic polyadenylation element-binding protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ASF8, A0A8J8YKD7, F6WCG8, G7MU03
    Related
    ENSMMUP00000080772.1, ENSMMUT00000105433.1
    Conserved Domains (3) summary
    pfam16366
    Location:655 → 716
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:472 → 563
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:580 → 660
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

  4. XM_015141429.2 → XP_014996915.1  cytoplasmic polyadenylation element-binding protein 4 isoform X2

    UniProtKB/TrEMBL
    H9G045
    Related
    ENSMMUP00000066208.1, ENSMMUT00000088406.1
    Conserved Domains (3) summary
    pfam16366
    Location:647 → 708
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:464 → 555
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:572 → 652
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
Nucleotide Protein
Heading Accession and Version

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