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Tekt5 tektin 5 [ Mus musculus (house mouse) ]

Gene ID: 70426, updated on 23-Jun-2021

Summary

Official Symbol
Tekt5provided by MGI
Official Full Name
tektin 5provided by MGI
Primary source
MGI:MGI:1917676
See related
Ensembl:ENSMUSG00000039179
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
3300001K11Rik
Expression
Biased expression in testis adult (RPKM 92.6) and cerebellum adult (RPKM 4.3) See more
Orthologs
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Genomic context

See Tekt5 in Genome Data Viewer
Location:
16; 16 A1
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (10175816..10213319, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (10357952..10395455, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (10361347..10395541, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene 1600 Neighboring gene predicted gene, 30724 Neighboring gene predicted gene, 41419 Neighboring gene nucleotide binding protein 1 Neighboring gene trans-golgi network vesicle protein 23A Neighboring gene predicted gene, 41420

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

General gene information

Markers

Homology

Clone Names

  • MGC144895

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in cilium movement involved in cell motility IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 
is_active_in microtubule cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 
is_active_in sperm flagellum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in sperm flagellum IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001291001.2NP_001277930.1  tektin-5

    See identical proteins and their annotated locations for NP_001277930.1

    Status: VALIDATED

    Source sequence(s)
    AC154311
    Consensus CDS
    CCDS70683.1
    UniProtKB/Swiss-Prot
    G5E8A8
    Related
    ENSMUSP00000046824.7, ENSMUST00000043415.13
    Conserved Domains (1) summary
    pfam03148
    Location:95474
    Tektin; Tektin family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    10175816..10213319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001099275.1: Suppressed sequence

    Description
    NM_001099275.1: This RefSeq was removed because currently there is insufficient support for the transcript and protein.
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