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CLDN1 claudin 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704330, updated on 5-Mar-2024

Summary

Official Symbol
CLDN1provided by VGNC
Official Full Name
claudin 1provided by VGNC
Primary source
VGNC:VGNC:71242
Locus tag
EGK_12212
See related
Ensembl:ENSMMUG00000001915
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
claudin-1
Orthologs
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Genomic context

Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (7536511..7551873)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (197017999..197033366, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 207 Neighboring gene claudin 16 Neighboring gene U6 spliceosomal RNA Neighboring gene nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1-like

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193969.1NP_001180898.1  claudin-1

    See identical proteins and their annotated locations for NP_001180898.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000282
    UniProtKB/TrEMBL
    A0A8J8XPK1, F6TZW7, G7MK86
    Related
    ENSMMUP00000002562.2, ENSMMUT00000002710.4
    Conserved Domains (1) summary
    pfam00822
    Location:5173
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    7536511..7551873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)