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Dhrs13 dehydrogenase/reductase (SDR family) member 13 [ Mus musculus (house mouse) ]

Gene ID: 70451, updated on 23-Jun-2021

Summary

Official Symbol
Dhrs13provided by MGI
Official Full Name
dehydrogenase/reductase (SDR family) member 13provided by MGI
Primary source
MGI:MGI:1917701
See related
Ensembl:ENSMUSG00000020834
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2610209N15Rik
Expression
Ubiquitous expression in CNS E18 (RPKM 9.9), adrenal adult (RPKM 9.8) and 28 other tissues See more
Orthologs
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Genomic context

See Dhrs13 in Genome Data Viewer
Location:
11; 11 B5
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (77923139..77928690)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (78032313..78037864)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (77845815..77851366)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53689 Neighboring gene PHD finger protein 12 Neighboring gene predicted gene, 51908 Neighboring gene dehydrogenase/reductase (SDR family) member 13, opposite strand Neighboring gene flotillin 2 Neighboring gene uncharacterized LOC118567921 Neighboring gene microRNA 144

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC141618

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables NADP-retinol dehydrogenase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in retinal metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
dehydrogenase/reductase SDR family member 13
Names
androgen-regulated short-chain dehydrogenase/reductase 1; prostate short-chain dehydrogenase reductase 1; likely ortholog of mouse cell line MC/9.IL4 derived transcript 1; CGI-82 protein; HCV core-binding protein
short chain dehydrogenase/reductase family 7C member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183286.2NP_899109.2  dehydrogenase/reductase SDR family member 13 precursor

    See identical proteins and their annotated locations for NP_899109.2

    Status: VALIDATED

    Source sequence(s)
    AK046465, BB637905
    Consensus CDS
    CCDS36236.1
    UniProtKB/Swiss-Prot
    Q5SS80
    Related
    ENSMUSP00000021187.6, ENSMUST00000021187.12
    Conserved Domains (2) summary
    cd05327
    Location:36304
    retinol-DH_like_SDR_c_like; retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs
    PRK06197
    Location:31312
    PRK06197; short chain dehydrogenase; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    77923139..77928690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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