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TUB TUB bipartite transcription factor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706054, updated on 5-Mar-2024

Summary

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Official Symbol
TUBprovided by VGNC
Official Full Name
TUB bipartite transcription factorprovided by VGNC
Primary source
VGNC:VGNC:78672
See related
Ensembl:ENSMMUG00000061392
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (57576335..57664164, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (58380396..58468359, complement)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672141 Neighboring gene LIM domain only 1 Neighboring gene RIC3 acetylcholine receptor chaperone Neighboring gene uncharacterized LOC106993343 Neighboring gene eukaryotic translation initiation factor 3 subunit F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubby protein homolog
Names
tubby bipartite transcription factor
tubby homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    57576335..57664164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028833727.1 → XP_028689560.1  tubby protein homolog isoform X2

    UniProtKB/TrEMBL
    I0FUS8
    Conserved Domains (2) summary
    pfam16322
    Location:35 → 253
    Tub_N; Tubby N-terminal
    pfam01167
    Location:273 → 517
    Tub; Tub family

  2. XM_002799651.3 → XP_002799697.1  tubby protein homolog isoform X4

    See identical proteins and their annotated locations for XP_002799697.1

    UniProtKB/TrEMBL
    F6ZVE9, I0FUS8
    Related
    ENSMMUP00000005202.4, ENSMMUT00000005526.4
    Conserved Domains (2) summary
    pfam01167
    Location:264 → 505
    Tub; Tub family
    pfam16322
    Location:35 → 243
    Tub_N; Tubby N-terminal

  3. XM_028833726.1 → XP_028689559.1  tubby protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A5F8A9Y3, G7NDY3
    Related
    ENSMMUP00000074191.1, ENSMMUT00000080292.1
    Conserved Domains (2) summary
    pfam16322
    Location:85 → 293
    Tub_N; Tubby N-terminal
    pfam01167
    Location:313 → 557
    Tub; Tub family

  4. XM_028833729.1 → XP_028689562.1  tubby protein homolog isoform X6

    UniProtKB/TrEMBL
    F6V6K5
    Conserved Domains (2) summary
    pfam16322
    Location:56 → 208
    Tub_N; Tubby N-terminal
    pfam01167
    Location:228 → 472
    Tub; Tub family

  5. XM_028833728.1 → XP_028689561.1  tubby protein homolog isoform X3

    UniProtKB/TrEMBL
    I0FUS8
    Conserved Domains (2) summary
    pfam16322
    Location:29 → 247
    Tub_N; Tubby N-terminal
    pfam01167
    Location:267 → 511
    Tub; Tub family

  6. XM_001104584.4 → XP_001104584.2  tubby protein homolog isoform X5

    UniProtKB/TrEMBL
    H9FZ91, I0FUS8
    Related
    ENSMMUP00000073065.1, ENSMMUT00000092820.1
    Conserved Domains (2) summary
    pfam01167
    Location:258 → 499
    Tub; Tub family
    pfam16322
    Location:29 → 237
    Tub_N; Tubby N-terminal
Nucleotide Protein
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