U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SYT6 synaptotagmin 6 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708175, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
SYT6provided by VGNC
Official Full Name
synaptotagmin 6provided by VGNC
Primary source
VGNC:VGNC:78162
See related
Ensembl:ENSMMUG00000009781
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SYT6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (110049454..110114691)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (115142544..115208308, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene pyruvate kinase PKM pseudogene Neighboring gene eukaryotic translation initiation factor 2 subunit 2 pseudogene Neighboring gene tripartite motif containing 33 Neighboring gene olfactomedin like 3 Neighboring gene homeodomain interacting protein kinase 1 Neighboring gene adaptor related protein complex 4 subunit beta 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
synaptotagmin-6
Names
synaptotagmin VI

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    110049454..110114691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015148734.2 → XP_015004220.2  synaptotagmin-6 isoform X3

    UniProtKB/TrEMBL
    G7MIJ7
    Conserved Domains (2) summary
    cd08385
    Location:230 → 354
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cd08403
    Location:363 → 496
    C2B_Synaptotagmin-3-5-6-9-10; C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

  2. XM_015148744.2 → XP_015004230.1  synaptotagmin-6 isoform X2

    UniProtKB/TrEMBL
    F6ZH51, H9FQC4
    Related
    ENSMMUP00000012798.3, ENSMMUT00000013658.4
    Conserved Domains (2) summary
    cd08385
    Location:145 → 269
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cd08403
    Location:278 → 411
    C2B_Synaptotagmin-3-5-6-9-10; C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

  3. XM_028830243.1 → XP_028686076.1  synaptotagmin-6 isoform X1

    Conserved Domains (2) summary
    cd08385
    Location:217 → 341
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cl14603
    Location:350 → 384
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials