SEMA3C semaphorin 3C [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: SEMA3Cprovided by VGNC
Official Full Name: semaphorin 3Cprovided by VGNC
Primary source: VGNC:VGNC:77161
See related: Ensembl:ENSMMUG00000011785
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	3	NC_041756.1 (125271188..125450284)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	3	NC_027895.1 (113318734..113496703)

Chromosome 3 - NC_041756.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

RH46160 (e-PCR)
- UniSTS:19819

RH80742 (e-PCR)
- UniSTS:84109

STS-N63008 (e-PCR)
- UniSTS:36772

STS-N38844 (e-PCR)
- UniSTS:81324

SEMA3C_394 (e-PCR)
- UniSTS:277699

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables chemorepellent activity	IEA Inferred from Electronic Annotation more info	PubMed
enables semaphorin receptor binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in axon guidance	IEA Inferred from Electronic Annotation more info	PubMed
involved_in negative chemotaxis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in negative regulation of axon extension involved in axon guidance	IEA Inferred from Electronic Annotation more info	PubMed
involved_in neural crest cell migration	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of cell migration	IEA Inferred from Electronic Annotation more info	PubMed
involved_in semaphorin-plexin signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: semaphorin-3C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001260533.1 → NP_001247462.1 semaphorin-3C precursor

See identical proteins and their annotated locations for NP_001247462.1

Status: PROVISIONAL

Source sequence(s)

JV045928

UniProtKB/TrEMBL

F7HNG1, G7MM02

Related

ENSMMUP00000015472.2, ENSMMUT00000016516.4

Conserved Domains (3) summary

cd11251
Location:45 → 514

Sema_3C; The Sema domain, a protein interacting module, of semaphorin 3C (Sema3C)

smart00423
Location:513 → 550

PSI; domain found in Plexins, Semaphorins and Integrins

cd05871
Location:574 → 664

Ig_Sema3; Immunoglobulin (Ig)-like domain of class III semaphorin Sema3