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PCBP3 poly(rC) binding protein 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709663, updated on 5-Mar-2024

Summary

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Official Symbol
PCBP3provided by VGNC
Official Full Name
poly(rC) binding protein 3provided by VGNC
Primary source
VGNC:VGNC:81735
See related
Ensembl:ENSMMUG00000003825
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PCBP3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (824765..1007503, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (817221..1099272, complement)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676696 Neighboring gene collagen type VI alpha 1 chain Neighboring gene solute carrier family 19 member 1 Neighboring gene collagen type XVIII alpha 1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly(rC)-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    824765..1007503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845216.1 → XP_028701049.1  poly(rC)-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5R473, A0A1D5R970, F7EKE2, F7HR72, F7HR75, H9F999
    Related
    ENSMMUP00000056861.2, ENSMMUT00000056322.2
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:309 → 383
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  2. XM_028845220.1 → XP_028701053.1  poly(rC)-binding protein 3 isoform X5

    UniProtKB/TrEMBL
    I0FSQ5
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:288 → 362
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  3. XM_028845218.1 → XP_028701051.1  poly(rC)-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZMN3, H9F999
    Related
    ENSMMUP00000065881.1, ENSMMUT00000094025.1
    Conserved Domains (1) summary
    cl00098
    Location:289 → 363
    KH-I; K homology (KH) RNA-binding domain, type I

  4. XM_028845217.1 → XP_028701050.1  poly(rC)-binding protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZD50, I0FSQ5
    Related
    ENSMMUP00000062564.1, ENSMMUT00000109730.1
    Conserved Domains (4) summary
    pfam03154
    Location:181 → 314
    Atrophin-1; Atrophin-1 family
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:308 → 382
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  5. XM_028845226.1 → XP_028701059.1  poly(rC)-binding protein 3 isoform X11

    UniProtKB/TrEMBL
    I0FSQ5
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 201
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:260 → 334
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  6. XM_028845224.1 → XP_028701057.1  poly(rC)-binding protein 3 isoform X9

    UniProtKB/TrEMBL
    I0FSQ5
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:265 → 339
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  7. XM_028845223.1 → XP_028701056.1  poly(rC)-binding protein 3 isoform X8

    UniProtKB/TrEMBL
    H9F999
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:266 → 340
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  8. XM_028845225.1 → XP_028701058.1  poly(rC)-binding protein 3 isoform X10

    UniProtKB/TrEMBL
    H9F999
    Conserved Domains (2) summary
    cd00105
    Location:270 → 332
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd02396
    Location:131 → 195
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

  9. XM_028845222.1 → XP_028701055.1  poly(rC)-binding protein 3 isoform X7

    UniProtKB/TrEMBL
    I0FSQ5
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:285 → 359
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  10. XM_028845221.1 → XP_028701054.1  poly(rC)-binding protein 3 isoform X6

    UniProtKB/TrEMBL
    F7EKE9, H9F999
    Related
    ENSMMUP00000035727.2, ENSMMUT00000042718.3
    Conserved Domains (3) summary
    cd22516
    Location:38 → 114
    KH-I_PCBP3_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22519
    Location:125 → 203
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:286 → 360
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  11. XM_028845228.1 → XP_028701061.1  poly(rC)-binding protein 3 isoform X13

    UniProtKB/TrEMBL
    H9F999
    Conserved Domains (3) summary
    cd22438
    Location:1 → 44
    KH-I_PCBP_rpt1; first type I K homology (KH) RNA-binding domain found in the family of poly(C)-binding proteins (PCBPs)
    cd22519
    Location:55 → 133
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:239 → 313
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  12. XM_028845229.1 → XP_028701062.1  poly(rC)-binding protein 3 isoform X13

    UniProtKB/TrEMBL
    H9F999
    Conserved Domains (3) summary
    cd22438
    Location:1 → 44
    KH-I_PCBP_rpt1; first type I K homology (KH) RNA-binding domain found in the family of poly(C)-binding proteins (PCBPs)
    cd22519
    Location:55 → 133
    KH-I_PCBP3_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins
    cd22522
    Location:239 → 313
    KH-I_PCBP3_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 3 (PCBP3) and similar proteins

  13. XM_028845232.1 → XP_028701065.1  poly(rC)-binding protein 3 isoform X16

    UniProtKB/TrEMBL
    I0FSQ5
    Conserved Domains (1) summary
    cd02396
    Location:131 → 195
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

  14. XM_028845231.1 → XP_028701064.1  poly(rC)-binding protein 3 isoform X15

    Conserved Domains (1) summary
    cl00098
    Location:38 → 114
    KH-I; K homology (KH) RNA-binding domain, type I

  15. XM_028845227.1 → XP_028701060.1  poly(rC)-binding protein 3 isoform X12

    UniProtKB/TrEMBL
    H9F999
    Conserved Domains (1) summary
    cl00098
    Location:38 → 114
    KH-I; K homology (KH) RNA-binding domain, type I

  16. XM_028845219.1 → XP_028701052.1  poly(rC)-binding protein 3 isoform X4

    UniProtKB/TrEMBL
    H9F999
    Conserved Domains (1) summary
    cd02396
    Location:131 → 195
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

  17. XM_028845230.1 → XP_028701063.1  poly(rC)-binding protein 3 isoform X14

    Conserved Domains (1) summary
    cd02396
    Location:131 → 195
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

RNA

  1. XR_003727830.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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