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SYNPO synaptopodin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711221, updated on 24-Jun-2020

Summary

Official Symbol
SYNPOprovided by VGNC
Official Full Name
synaptopodinprovided by VGNC
Primary source
VGNC:VGNC:78253
See related
Ensembl:ENSMMUG00000005414
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
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Genomic context

See SYNPO in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (148110256..148169163)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (148770225..148811197)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S14 Neighboring gene N-deacetylase and N-sulfotransferase 1 Neighboring gene small nucleolar RNA U13 Neighboring gene myozenin 3 Neighboring gene uncharacterized LOC114678943

Genomic regions, transcripts, and products

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    148110256..148169163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015141238.2XP_014996724.2  synaptopodin isoform X1

    Related
    ENSMMUP00000027211.3, ENSMMUT00000029084.4
    Conserved Domains (1) summary
    PHA03247
    Location:180608
    PHA03247; large tegument protein UL36; Provisional
  2. XM_028849835.1XP_028705668.1  synaptopodin isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:557841
    PHA03247; large tegument protein UL36; Provisional
    PRK13914
    Location:15128
    PRK13914; invasion associated secreted endopeptidase; Provisional
  3. XM_001099989.4XP_001099989.3  synaptopodin isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:557841
    PHA03247; large tegument protein UL36; Provisional
    PRK13914
    Location:15128
    PRK13914; invasion associated secreted endopeptidase; Provisional
  4. XM_028849836.1XP_028705669.1  synaptopodin isoform X2

    Related
    ENSMMUP00000061284.1, ENSMMUT00000101107.1
    Conserved Domains (2) summary
    PHA03247
    Location:557841
    PHA03247; large tegument protein UL36; Provisional
    PRK13914
    Location:15128
    PRK13914; invasion associated secreted endopeptidase; Provisional
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