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Tex52 testis expressed 52 [ Mus musculus (house mouse) ]

Gene ID: 71149, updated on 23-Jun-2021

Summary

Official Symbol
Tex52provided by MGI
Official Full Name
testis expressed 52provided by MGI
Primary source
MGI:MGI:1918399
See related
Ensembl:ENSMUSG00000079304
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933413G19Rik
Expression
Biased expression in limb E14.5 (RPKM 69.5), large intestine adult (RPKM 34.3) and 10 other tissues See more
Orthologs
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Genomic context

See Tex52 in Genome Data Viewer
Location:
6; 6 F3
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (128352473..128362107)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (128375510..128385144)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (128325528..128335162)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene tubby-like protein 3 Neighboring gene RAD9-HUS1-RAD1 interacting nuclear orphan 1 Neighboring gene forkhead box M1 Neighboring gene nuclear receptor interacting protein 2 Neighboring gene integrin alpha FG-GAP repeat containing 2 Neighboring gene FK506 binding protein 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
testis-expressed protein 52

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027697.1NP_081973.1  testis-expressed protein 52

    See identical proteins and their annotated locations for NP_081973.1

    Status: PROVISIONAL

    Source sequence(s)
    AK161342
    Consensus CDS
    CCDS51916.1
    UniProtKB/Swiss-Prot
    Q3TTI8
    Related
    ENSMUSP00000098486.3, ENSMUST00000100926.4
    Conserved Domains (1) summary
    pfam15046
    Location:28306
    DUF4532; Protein of unknown function (DUF4532)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    128352473..128362107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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