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Naif1 nuclear apoptosis inducing factor 1 [ Mus musculus (house mouse) ]

Gene ID: 71254, updated on 23-Jun-2021

Summary

Official Symbol
Naif1provided by MGI
Official Full Name
nuclear apoptosis inducing factor 1provided by MGI
Primary source
MGI:MGI:1918504
See related
Ensembl:ENSMUSG00000039164
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2310007O20Rik; 4933440H19Rik
Expression
Ubiquitous expression in testis adult (RPKM 9.3), adrenal adult (RPKM 8.1) and 28 other tissues See more
Orthologs
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Genomic context

See Naif1 in Genome Data Viewer
Location:
2; 2 B
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (32340469..32345488)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (32450457..32455476)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (32305977..32310996)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 2 Neighboring gene predicted gene 13413 Neighboring gene solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 Neighboring gene family with sequence similarity 102, member A Neighboring gene dolichol-phosphate (beta-D) mannosyltransferase 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
nuclear apoptosis-inducing factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_194335.2NP_919316.1  nuclear apoptosis-inducing factor 1

    See identical proteins and their annotated locations for NP_919316.1

    Status: PROVISIONAL

    Source sequence(s)
    AK029812
    Consensus CDS
    CCDS15916.1
    UniProtKB/Swiss-Prot
    Q6PFD7
    Related
    ENSMUSP00000048764.3, ENSMUST00000048431.3
    Conserved Domains (1) summary
    pfam13873
    Location:882
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    32340469..32345488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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