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SCRT1 scratch family transcriptional repressor 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714311, updated on 5-Mar-2024

Summary

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Official Symbol
SCRT1provided by VGNC
Official Full Name
scratch family transcriptional repressor 1provided by VGNC
Primary source
VGNC:VGNC:77021
See related
Ensembl:ENSMMUG00000028886
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (144616856..144622736, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (143576847..143582751, complement)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor 1 Neighboring gene uncharacterized LOC106999992 Neighboring gene diacylglycerol O-acyltransferase 1 Neighboring gene transmembrane protein 249 Neighboring gene F-box and leucine rich repeat protein 6 Neighboring gene solute carrier family 52 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional repressor scratch 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    144616856..144622736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015146278.2 → XP_015001764.2  transcriptional repressor scratch 1

    UniProtKB/TrEMBL
    F6X2S7
    Related
    ENSMMUP00000031851.3, ENSMMUT00000038770.3
    Conserved Domains (2) summary
    COG5048
    Location:245 → 313
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:250 → 270
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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