U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LCA5L lebercilin LCA5 like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 715569, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
LCA5Lprovided by VGNC
Official Full Name
lebercilin LCA5 likeprovided by VGNC
Primary source
VGNC:VGNC:74039
See related
Ensembl:ENSMMUG00000010407
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LCA5L in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (7168226..7212117)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (7235813..7279672)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 5 Neighboring gene myosin light polypeptide 6-like Neighboring gene SH3 domain binding glutamate rich protein Neighboring gene uncharacterized LOC114676804 Neighboring gene guided entry of tail-anchored proteins factor 1 Neighboring gene small nucleolar RNA U13 Neighboring gene high mobility group nucleosome binding domain 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lebercilin-like protein
Names
LCA5L, lebercilin like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194409.2 → NP_001181338.1  lebercilin-like protein

    See identical proteins and their annotated locations for NP_001181338.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000307
    UniProtKB/TrEMBL
    F7D2V2, G7MMR9
    Related
    ENSMMUP00000062773.1, ENSMMUT00000084400.1
    Conserved Domains (1) summary
    pfam15619
    Location:146 → 325
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    7168226..7212117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845058.1 → XP_028700891.1  lebercilin-like protein isoform X5

  2. XM_028845051.1 → XP_028700884.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  3. XM_015132856.2 → XP_014988342.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  4. XM_028845054.1 → XP_028700887.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  5. XM_028845052.1 → XP_028700885.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  6. XM_028845053.1 → XP_028700886.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  7. XM_028845050.1 → XP_028700883.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  8. XM_015132864.2 → XP_014988350.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  9. XM_015132855.2 → XP_014988341.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  10. XM_028845049.1 → XP_028700882.1  lebercilin-like protein isoform X1

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:195 → 374
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  11. XM_015132866.2 → XP_014988352.1  lebercilin-like protein isoform X2

    UniProtKB/TrEMBL
    F7D2V2, G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:146 → 325
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  12. XM_028845055.1 → XP_028700888.1  lebercilin-like protein isoform X2

    UniProtKB/TrEMBL
    F7D2V2, G7MMR9
    Related
    ENSMMUP00000064113.1, ENSMMUT00000104372.1
    Conserved Domains (1) summary
    pfam15619
    Location:146 → 325
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  13. XM_028845056.1 → XP_028700889.1  lebercilin-like protein isoform X3

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:44 → 223
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

  14. XM_028845057.1 → XP_028700890.1  lebercilin-like protein isoform X4

    UniProtKB/TrEMBL
    G7MMR9
    Conserved Domains (1) summary
    pfam15619
    Location:16 → 195
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.