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SH2D5 SH2 domain containing 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717509, updated on 5-Mar-2024

Summary

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Official Symbol
SH2D5provided by VGNC
Official Full Name
SH2 domain containing 5provided by VGNC
Primary source
VGNC:VGNC:77324
See related
Ensembl:ENSMMUG00000008847
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SH2D5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (203979597..203994364)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (19528482..19541446, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma 3 Neighboring gene U7 small nuclear RNA Neighboring gene heterochromatin protein 1 binding protein 3 Neighboring gene uncharacterized LOC114673957 Neighboring gene kinesin family member 17 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH2 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266317.1 → NP_001253246.1  SH2 domain-containing protein 5

    See identical proteins and their annotated locations for NP_001253246.1

    Status: PROVISIONAL

    Source sequence(s)
    JU334486
    UniProtKB/TrEMBL
    A0A5K1TY50, G7MHE4
    Related
    ENSMMUP00000011603.4, ENSMMUT00000012371.4
    Conserved Domains (2) summary
    cd00173
    Location:300 → 376
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 150
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    203979597..203994364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015129374.2 → XP_014984860.2  SH2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7DZ09, G7MHE4, H9FUD0
    Conserved Domains (2) summary
    cd00173
    Location:300 → 376
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 150
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  2. XM_028845850.1 → XP_028701683.1  SH2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7DZ09, G7MHE4, H9FUD0
    Conserved Domains (2) summary
    cd00173
    Location:300 → 376
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 150
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  3. XM_028845854.1 → XP_028701687.1  SH2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7DZ09, G7MHE4, H9FUD0
    Conserved Domains (2) summary
    cd00173
    Location:300 → 376
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 150
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  4. XM_028845855.1 → XP_028701688.1  SH2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7DZ09, G7MHE4, H9FUD0
    Conserved Domains (2) summary
    cd00173
    Location:300 → 376
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 150
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  5. XM_015129315.2 → XP_014984801.2  SH2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7DZ09, G7MHE4, H9FUD0
    Conserved Domains (2) summary
    cd00173
    Location:300 → 376
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 150
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain
Nucleotide Protein
Heading Accession and Version

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