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COL6A5 collagen type VI alpha 5 chain [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719331, updated on 5-Mar-2024

Summary

Gene symbol
COL6A5
Gene description
collagen type VI alpha 5 chain
See related
Ensembl:ENSMMUG00000020377
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
COL29A1
Orthologs
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Genomic context

Location:
chromosome: 2
Exon count:
41
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (32676582..32801211)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (171492139..171617108, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-4(VI) chain-like Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial pseudogene Neighboring gene collagen type VI alpha 6 chain Neighboring gene phosphoinositide-3-kinase regulatory subunit 4

Genomic regions, transcripts, and products

General protein information

Preferred Names
collagen alpha-5(VI) chain
Names
collagen alpha-5(VI) chain-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    32676582..32801211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015132208.2XP_014987694.2  collagen alpha-5(VI) chain

    UniProtKB/TrEMBL
    A0A5F8A5L3
    Related
    ENSMMUP00000072652.1, ENSMMUT00000098174.1
    Conserved Domains (5) summary
    cd01450
    Location:22892466
    vWFA_subfamily_ECM; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cd01472
    Location:627788
    vWA_collagen; von Willebrand factor (vWF) type A domain; equivalent to the I-domain of integrins. This domain has a variety of functions including: intermolecular adhesion, cell migration, signalling, transcription, and DNA repair. In integrins these domains form ...
    pfam03157
    Location:13951734
    Glutenin_hmw; High molecular weight glutenin subunit
    pfam00092
    Location:814985
    VWA; von Willebrand factor type A domain
    cl00057
    Location:235390
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...