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Cracdl capping protein inhibiting regulator of actin like [ Mus musculus (house mouse) ]

Gene ID: 72097, updated on 23-Jun-2021

Summary

Official Symbol
Cracdlprovided by MGI
Official Full Name
capping protein inhibiting regulator of actin likeprovided by MGI
Primary source
MGI:MGI:1919347
See related
Ensembl:ENSMUSG00000026090
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010300C02Rik
Expression
Biased expression in frontal lobe adult (RPKM 20.2), cortex adult (RPKM 19.8) and 11 other tissues See more
Orthologs
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Genomic context

See Cracdl in Genome Data Viewer
Location:
1; 1 B
Exon count:
14
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (37650757..37759170, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (37611676..37720089, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (37668521..37776656, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene mannoside acetylglucosaminyltransferase 4, isoenzyme A Neighboring gene G1 to S phase transition pseudogene Neighboring gene predicted gene, 39627 Neighboring gene RIKEN cDNA 4930556I23 gene Neighboring gene RIKEN cDNA 4930470B04 gene Neighboring gene predicted gene, 39628 Neighboring gene testis specific 10 Neighboring gene lipoyltransferase 1 Neighboring gene MIT, microtubule interacting and transport, domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028096.1NP_082372.1  CRACD-like protein

    Status: VALIDATED

    Source sequence(s)
    AC140321, BB048237, BC072639, BQ559383, CX123616
    Consensus CDS
    CCDS48242.1
    UniProtKB/TrEMBL
    E9Q3M9, Q6GQT3
    Related
    ENSMUSP00000123803.2, ENSMUST00000162875.8
    Conserved Domains (4) summary
    PTZ00436
    Location:500628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:6951039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145243
    DUF4592; Domain of unknown function (DUF4592)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    37650757..37759170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006496296.4XP_006496359.1  CRACD-like protein isoform X4

    See identical proteins and their annotated locations for XP_006496359.1

    Conserved Domains (4) summary
    PTZ00436
    Location:500628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:6951039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145243
    DUF4592; Domain of unknown function (DUF4592)
  2. XM_006496295.5XP_006496358.1  CRACD-like protein isoform X4

    See identical proteins and their annotated locations for XP_006496358.1

    Conserved Domains (4) summary
    PTZ00436
    Location:500628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:6951039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145243
    DUF4592; Domain of unknown function (DUF4592)
  3. XM_006496297.3XP_006496360.1  CRACD-like protein isoform X4

    See identical proteins and their annotated locations for XP_006496360.1

    Conserved Domains (4) summary
    PTZ00436
    Location:500628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:6951039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145243
    DUF4592; Domain of unknown function (DUF4592)
  4. XM_036153695.1XP_036009588.1  CRACD-like protein isoform X3

    Conserved Domains (4) summary
    PTZ00436
    Location:522650
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:452840
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:7171061
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:167265
    DUF4592; Domain of unknown function (DUF4592)
  5. XM_036153696.1XP_036009589.1  CRACD-like protein isoform X5

    Conserved Domains (4) summary
    PTZ00436
    Location:500628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:6951039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145243
    DUF4592; Domain of unknown function (DUF4592)
  6. XM_006496292.5XP_006496355.2  CRACD-like protein isoform X2

    Conserved Domains (4) summary
    PTZ00436
    Location:528656
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:458846
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:7231067
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:173271
    DUF4592; Domain of unknown function (DUF4592)
  7. XM_006496291.5XP_006496354.2  CRACD-like protein isoform X1

    Conserved Domains (4) summary
    PTZ00436
    Location:528656
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:458846
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:7231067
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:173271
    DUF4592; Domain of unknown function (DUF4592)
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