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Aldh1b1 aldehyde dehydrogenase 1 family, member B1 [ Mus musculus (house mouse) ]

Gene ID: 72535, updated on 23-Jun-2021

Summary

Official Symbol
Aldh1b1provided by MGI
Official Full Name
aldehyde dehydrogenase 1 family, member B1provided by MGI
Primary source
MGI:MGI:1919785
See related
Ensembl:ENSMUSG00000035561
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2700007F14Rik
Expression
Biased expression in large intestine adult (RPKM 182.6), duodenum adult (RPKM 64.0) and 9 other tissues See more
Orthologs
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Genomic context

See Aldh1b1 in Genome Data Viewer
Location:
4; 4 B1
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (45799022..45804608)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (45799022..45804608)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (45811894..45817480)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31563 Neighboring gene predicted gene 12409 Neighboring gene insulin-like growth factor binding protein-like 1 Neighboring gene STRA6-like Neighboring gene coiled-coil domain containing 180

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC101971

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
aldehyde dehydrogenase X, mitochondrial
Names
aldehyde dehydrogenase family 1 member B1
NP_082546.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028270.4NP_082546.1  aldehyde dehydrogenase X, mitochondrial precursor

    See identical proteins and their annotated locations for NP_082546.1

    Status: VALIDATED

    Source sequence(s)
    AK153416, AW555370, CJ158368
    Consensus CDS
    CCDS18139.1
    UniProtKB/Swiss-Prot
    Q9CZS1
    Related
    ENSMUSP00000041260.5, ENSMUST00000044384.5
    Conserved Domains (2) summary
    cd07141
    Location:33513
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
    PLN02466
    Location:22518
    PLN02466; aldehyde dehydrogenase family 2 member

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    45799022..45804608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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