SPATA31A5 SPATA31 subfamily A member 5 [Homo sapiens (human)] - Gene

Summary

Official Symbol: SPATA31A5provided by HGNC
Official Full Name: SPATA31 subfamily A member 5provided by HGNC
Primary source: HGNC:HGNC:32005
See related: Ensembl:ENSG00000276581 AllianceGenome:HGNC:32005
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: FAM75A5
Summary: Predicted to be involved in cell differentiation and spermatogenesis. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression: Restricted expression toward testis (RPKM 8.0) See more
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Genomic context

Location:: 9q12

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	9	NC_000009.12 (60914372..60920653)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	9	NC_000009.11 (41500679..41506925)

Chromosome 9 - NC_000009.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Gene Ontology Provided by GOA

Process	Evidence Code	Pubs
involved_in cell differentiation	IEA Inferred from Electronic Annotation more info
involved_in spermatogenesis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: spermatogenesis-associated protein 31A5

Names: family with sequence similarity 75, member A5; protein FAM75A5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001113541.3 → NP_001107013.1 spermatogenesis-associated protein 31A5

See identical proteins and their annotated locations for NP_001107013.1

Status: VALIDATED

Source sequence(s)

AL590491

Consensus CDS

CCDS47970.1

UniProtKB/Swiss-Prot

Q5VU36

UniProtKB/TrEMBL

B2RUU1

Related

ENSP00000485628.1, ENST00000437823.5

Conserved Domains (2) summary

pfam14650
Location:396 → 754

FAM75; FAM75 family

pfam15371
Location:76 → 155

DUF4599; Domain of unknown function (DUF4599)