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FAM90A19 family with sequence similarity 90 member A19 [ Homo sapiens (human) ]

Gene ID: 728753, updated on 8-Nov-2023

Summary

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Official Symbol
FAM90A19provided by HGNC
Official Full Name
family with sequence similarity 90 member A19provided by HGNC
Primary source
HGNC:HGNC:32267
See related
Ensembl:ENSG00000285657 MIM:613053; AllianceGenome:HGNC:32267
Gene type
protein coding
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM90A18P; FAM90A19P
Summary
FAM90A19 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, Oct 2009]
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Genomic context

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See FAM90A19 in Genome Data Viewer
Location:
8p23.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (7753682..7756692)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (11899634..11902644)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (7611204..7614214)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene family with sequence similarity 90 member A8 Neighboring gene family with sequence similarity 90 member A17 Neighboring gene family with sequence similarity 90 member A9 Neighboring gene family with sequence similarity 90 member A10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. Bosch N, et al. Gene, 2008 Sep 1. PMID 18602769
  2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. Bosch N, et al. Hum Mol Genet, 2007 Nov 1. PMID 17684299

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General protein information

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Preferred Names
protein FAM90A19
Names
Protein FAM90A19
family with sequence similarity 90 member A19, pseudogene
putative protein FAM90A18/FAM90A19
putative protein FAM90A18P/FAM90A19P

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164449.1 → NP_001157921.1  protein FAM90A19

    Status: INFERRED

    Source sequence(s)
    AC084121
    UniProtKB/Swiss-Prot
    A6NE21, P0DV75, P0DV76, Q658T7
    Related
    ENSP00000497020.1, ENST00000647903.1
    Conserved Domains (2) summary
    PHA03247
    Location:25 → 375
    PHA03247; large tegument protein UL36; Provisional
    pfam15288
    Location:41 → 76
    zf-CCHC_6; Zinc knuckle

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    7753682..7756692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_018654717.1 Reference GRCh38.p14 PATCHES

    Range
    651991..655001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    11899634..11902644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0DV76.1 GenPept UniProtKB/Swiss-Prot:P0DV76

Gene LinkOut

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