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Zfp493 zinc finger protein 493 [ Mus musculus (house mouse) ]

Gene ID: 72958, updated on 23-Jun-2021

Summary

Official Symbol
Zfp493provided by MGI
Official Full Name
zinc finger protein 493provided by MGI
Primary source
MGI:MGI:1920208
See related
Ensembl:ENSMUSG00000090659
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rslcan12; 2900054J07Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

See Zfp493 in Genome Data Viewer
Location:
13; 13 B3
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (67927812..67937201)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (67779693..67789082)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (67880630..67890019)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 85, opposite strand Neighboring gene zinc finger protein 85 Neighboring gene zinc finger protein 85, related sequence 1 pseudogene Neighboring gene RIKEN cDNA 4930525G20 gene Neighboring gene ribosomal protein, large, P0 pseudogene Neighboring gene zinc finger protein 273

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
regulator of sex-limitation candidate 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028402.2NP_082678.2  regulator of sex-limitation candidate 12

    Status: VALIDATED

    Source sequence(s)
    CT030194
    Consensus CDS
    CCDS49304.1
    UniProtKB/TrEMBL
    E9Q1L8
    Related
    ENSMUSP00000132282.2, ENSMUST00000164936.10
    Conserved Domains (5) summary
    smart00349
    Location:565
    KRAB; krueppel associated box
    COG5048
    Location:191327
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:83103
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:544
    KRAB; KRAB box
    pfam13465
    Location:124148
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    67927812..67937201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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