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LOC730338 uncharacterized LOC730338 [ Homo sapiens (human) ]

Gene ID: 730338, updated on 10-Oct-2023

Summary

Gene symbol
LOC730338
Gene description
uncharacterized LOC730338
See related
Ensembl:ENSG00000233539
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC730338 in Genome Data Viewer
Location:
7p12.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (46687879..46697122, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (46849269..46858515, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (46727477..46736720, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375266 Neighboring gene ZNF619P1-HMGN1P19 intergenic nontranscribed chromatin-defined enhancer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:46574043-46574599 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:46574600-46575155 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:46576337-46576836 Neighboring gene NANOG hESC enhancer GRCh37_chr7:46666250-46666778 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:46690590-46691789 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 19 Neighboring gene epidermal growth factor receptor pathway substrate 15 pseudogene 1 Neighboring gene uncharacterized LOC124901626

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134575.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011294, AK125311
    Related
    ENST00000451905.4

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    46687879..46697122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    46849269..46858515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)