U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Speer6-ps1 spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 73266, updated on 16-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
Speer6-ps1provided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1provided by MGI
Primary source
MGI:MGI:1920516
See related
Ensembl:ENSMUSG00000121349 AllianceGenome:MGI:1920516
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AlbCre; Alb-cre; SPEER-6; cr<Alb>; Alb<cre>; albumin-cre; 1700039A02Rik; Tg(Alb-cre)21Mgn
Expression
Restricted expression toward testis adult (RPKM 6.2) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
13 A1; 13 1.78 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (3199475..3239678)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (3149475..3189678)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 4 pseudogene Neighboring gene polypyrimidine tract binding protein 1 pseudogene Neighboring gene predicted gene, 40644 Neighboring gene STARR-seq mESC enhancer starr_33466 Neighboring gene STARR-seq mESC enhancer starr_33467 Neighboring gene STARR-seq mESC enhancer starr_33468 Neighboring gene predicted gene, 40648 Neighboring gene STARR-seq mESC enhancer starr_33469 Neighboring gene STARR-seq mESC enhancer starr_33470 Neighboring gene STARR-seq mESC enhancer starr_33471 Neighboring gene predicted gene, 40653

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Recombinant covalently closed circular hepatitis B virus DNA induces prolonged viral persistence in immunocompetent mice. Qi Z, et al. J Virol, 2014 Jul. PMID 24807718, Free PMC Article
  2. The role of cytochrome P450-dependent metabolism in the regulation of mouse hepatic growth hormone signaling components and target genes by 3-methylcholanthrene. Lee C, et al. Drug Metab Dispos, 2013 Feb. PMID 23169610, Free PMC Article
  3. Aberrant transcription and post-transcriptional processing of hepatitis C virus non-structural genes in transgenic mice. Desai MM, et al. Transgenic Res, 2011 Dec. PMID 21347690, Free PMC Article
  4. DNA excision in liver by an albumin-Cre transgene occurs progressively with age. Postic C, et al. Genesis, 2000 Feb. PMID 10686614
  5. Selective Hepatic Cbs Knockout Aggravates Liver Damage, Endothelial Dysfunction and ROS Stress in Mice Fed a Western Diet. Lambooy S, et al. Int J Mol Sci, 2023 Apr 10. PMID 37108182, Free PMC Article

See all (1368) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Go to the top of the page Help

Markers

Other Names

  • sperm-associated glutamate (E)-rich protein 6, pseudogene

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001581.3 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC124744, AC125190
    Related
    ENSMUST00000223482.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    3199475..3239678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_028486.1: Suppressed sequence

    Description
    NM_028486.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.